Examples
FeRx includes several example models in the examples/ directory with corresponding datasets in data/.
| Example | Model | Route | Features |
|---|---|---|---|
| One-Compartment Oral | 1-cpt | Oral | Basic PopPK, FOCE and SAEM |
| Two-Compartment IV | 2-cpt | IV bolus | Multi-compartment dynamics |
| Covariates | 2-cpt | Oral | Weight and renal function effects |
| ODE Model | 1-cpt | Oral | Michaelis-Menten elimination, ODE solver |
| BLOQ (M3 method) | 1-cpt | Oral | Likelihood-based handling of censored observations |
Running Examples
# One-compartment oral (warfarin)
ferx examples/warfarin.ferx --data data/warfarin.csv
# Two-compartment IV
ferx examples/two_cpt_iv.ferx --data data/two_cpt_iv.csv
# Covariates model
ferx examples/two_cpt_oral_cov.ferx --data data/two_cpt_oral_cov.csv
# ODE model (Michaelis-Menten)
ferx examples/mm_oral.ferx --data data/mm_oral.csv
# SAEM estimation
ferx examples/warfarin_saem.ferx --data data/warfarin.csv
# BLOQ (M3 method)
ferx examples/warfarin-bloq.ferx --data data/warfarin-bloq.csv