Compile ODE model to c++ function
Usage
compile_sim_cpp(
code,
dose_code,
pk_code,
size,
p,
cpp_show_code,
code_init = NULL,
state_init = NULL,
declare_variables = NULL,
variables = NULL,
covariates = NULL,
obs = NULL,
dose = NULL,
iov = NULL,
compile = TRUE,
verbose = FALSE,
as_is = FALSE
)Arguments
- code
C++ code ODE system
- dose_code
C++ code per dose event
- pk_code
C++ code per any event (similar to $PK)
- size
size of ODE system
- p
parameters (list)
- cpp_show_code
show output c++ function?
- code_init
code for initialization of state
- state_init
state init vector
- declare_variables
variable declaration for all required variables (including user-specified)
- variables
only the user-specified variables
- covariates
covariates specification
- obs
observation specification
- dose
dose specification
- iov
iov specification
- compile
compile or not?
- verbose
show more output
- as_is
use C-code as-is, don't substitute line-endings or shift indices